Welcome to the New T3/Wheat Sandbox
T3 is a repository for public wheat data generated by the Wheat Coordinated Agricultural Project (Wheat CAP). Funding is provided by the National Institute for Food and Agriculture (NIFA) and the United States Department of Agriculture (USDA). The current project is funded through NIFA's International Wheat Yield Partnership (IWYP) and part of the Agriculture and Food Research Initiative (AFRI).
Leave FeedbackThe New T3 is the next evolution of The Triticeae Toolbox (T3). We are in the process of transitioning all of T3's data and tools to this new system. We encourage you to leave feedback about feature improvements, missing tools, and/or any ideas you may have to improve the site.
Scab Forum Presentation
Dec 9, 2019
The presentation (with step-by-step screenshots of the demos) of T3/Breedbase given at the 2019 Wheat & Barley Scab Forum can be found here.
T3 Phenotype Data Loaded
Nov 29, 2019
2456 Phenotype trials and mean data loaded from T3.
Analyze, Selection Index
The Selection Index determines rankings of accessions based on more than one trait
Analyze, Summarize Trials
Summarize Trials shows Least squares mean values in selected Trials
Search, Loci & Genes
Search Loci & Genes allows you to search for genetic characters and associated accessions
Explore T3
To view most of the data on T3, you'll first need to create a free account.
Login
If you already have an account, login to get full access.
Use the Search Wizard to explore the database using various types of metadata.
Alternatively, you can search specifically for Accessions, Trials, Traits, Genoptyping Projects, or Markers
Submit Phenotype Data
To submit phenotype data to T3 follow these three general steps:
Step 1: Create Upload Templates
Data submitted to T3 should be in the format of the upload template for the data type you are submitting. View the detailed upload instructions for specific information on each data type.
Step 2: Add Data to Sandbox
Once you have your upload templates, you can test-load them on this Sandbox site to check for any errors.
Step 3: Submit Trial Data
If your trial data has been successfully added to the Sandbox you can submit your trials directly to the production site by clicking the Submit Trial button on the trial detail page.
If your data has not been added to the Sandbox or if you would prefer to submit your files directly to the production site, you can submit your individual upload templates or data files to us using the Phenotype Submission Form.
Detailed Upload Instructions
User Guides
Read DocumentationNew to T3?
View the Documentation to learn about available features.
Blake, V., Birkett, C.L., Matthews, D.E., Hane, D., Bradbury, P., Jannink, J. 2015. The Triticeae Toolbox: Combining Phenotype and Genotype Data to Advance Small-Grains Breeding. The Plant Genome. doi: 10.3835/PlantGenome2014.12.0099.
T3 is open source software and available under the MIT License and may be downloaded from GitHub.
Working
